RNA提取纯化试剂

RNA interference protocol

.

WeusethePromegaRibomaxLargeScaleRNAProductionSystemT7(Cat.No.:P1300)toproducedsRNAsandtheJackDixonprotocol(downloadedversion,15.1.2003)topreparedsRNAs.

I.PreparationofTemplateDNA

  1. Designtwooligosforyourgeneofinterest.Eachshouldincorporatea5"T7RNApolymerasebindingsite,resultinginaPCRproductofapproximately700bp.
  2. T7RNApolymerasebindingsite:TTAATACGACTCACTATAGGGAGG
  3. PurifythePCRDNAtemplateItshouldbefreeofRNasesandinhibitorssuchashighsalt,detergentsorEDTA.
  4. QuantifythePCRProductonanagarosegel.ThedsRNAreactiondetailedbelowrequires5-10µgtotalDNAin40µl.

II.PreparationofthedsRNA

WeusethePromegaRibomaxLargeScaleRNAProductionSystemT7.Wemodifythesuppliedprotocolasfollows:

  1. Preparethetemplatesasdescribedabove.
  2. Addthefollowingreagentsfromthekitina1.5mlEppendorftubeatRT.Fora100µlreaction:
    • 20µlBuffer5x
    • 30µlrNTPs(25µM)
    • DNA5µg
    • 10µlT7enzymemix
    • nucleasefreewatertoafinalvolumeof100µl
  3. Mixtubegently,spincontentsdownandincubateat37˚Cfor2to6hoursorovernight
  4. Add2µlofRNasefreeDnase.Incubatefor1hat37¾C.Add200µlofnucleasefreewaterandextracttheRNAwithPhenol:Chloroform
  5. Ethanolprecipitateyourreactions
  6. ResUSPendthepelletin100µl-200µlwater.
  7. Heatyourreactionstubesat70˚Cfor30min.
  8. Placetubesinabeakerof80˚CwateronthebenchandslowlycooltoroomtemperaturetoannealtheRNA.
  9. AdjustthefinalconcentrationofyourdsRNAto3µg/µl,usingthefollowingcalculation:OD260nm1=45µg/ml
  10. Run1-2µgofyourdsRNAona1%AgarosegeltochecktheintegrityandsizeofthedsRNA.A100µlreactiontypicallyyieldsupto1mgofdsRNA.

III.RNAiinDrosophilaSchneidercells.

  1. WashyourDrosophilacellswithserumfreemediumandplatethemintoabigflaskwith2x106cells/ml.
  2. Add15µgdsRNAtoper106cells(notice:checkforknockdownefficiencyanduseappropriateamountsofdsRNA)
  3. SwirlflaskswelltomixRNAandcells.
  4. Incubatefor1-3hoursintheincubator.
  5. AddthesamevolumeofDrosophilaSchneiderMediumsupplementedwithdoubleamountsofFetalCalfSerum,Penicillin/StreptomycinandGlutaminetobringthemediumbacktonormalgrowthconditions.
  6. Harvest3-4dayslater,dependingonyourknockdownefficiency.

================  蚂蚁淘在线  ================

免责声明:本文仅代表作者个人观点,与本网无关。其创作性以及文中陈述文字和内容未经本站证实,对本文以及其中全部或者部分内容、文字的真实性、完整性、及时性本站不做任何保证或承诺,请读者仅作参考,并请自行核实相关内容

版权声明:未经蚂蚁淘在线授权不得转载、摘编或利用其他方式使用上述作品。已经经本网授权使用作品的,应该授权范围内使用,并注明“来源:蚂蚁淘在线”。违反上述声明者,本网将追究其相关法律责任。