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CsCl Prep of Plasmid DNA
CsClPrepofPlasmidDNA
Thisisastandardlargescaleprep.forplasmidDNAwhichgivesayieldof0.5-1.0mg.IhavemadesomeminorchangestotheMHBprotocol.
Solutions
SolutionI,II,IIIfromprotocolD.1.
Tris/EDTApH7.5(optional)
20ml1MTris7.5
4ml0.5MEDTA8.0
upto2literswithQ
storeat4degreesfordialysis
DialysisTubing(optional)
Thetubingisstoreddryat4degrees(Spectrapore12,000-14,000molecularweightcutoff)
cuta1-2metersegmentandimmerseinQ
autoclavefor10minutesonfastexhaust
storeat4degreesin20%EtOH
priortouse,washinTE
Procedure
•Starta500mlculturewiththeappropriateantibioticapproximately24hoursinadvancebyinnoculatingasinglecolony.
•Harvestthecellsbyspinningina500mlbottleintheJ6Bat4.2Kfor20minutes.ResUSPendthepelletgentlyin30mlSolutionIwith1mg/mllysozyme(Sigma#L6876).
•Transferimmediatelytoa250mlbottleoniceandadd60mlSolutionII,followedby45mlSolutionIII.ImmediatelyspinintheSorvallGSArotorat10Kfor10".
•Transferthesupernatanttoaclean250mlbottleandspinfor10"at10K(optionalifthereisstillsomeprecipitateafterthefirstspin).Transferthesupernatantfromthisspintoanother250mlbottlefilteringthroughseverallayersofcheesecloth.
•Add1volumeofisopropanolandincubateatroomtemperaturefor5-10minutesfollowedbya10Kspinfor30".
•Thoroughlydrythepelletandresuspendin6mlTE.Transfer5.5mltoa13mlsnaptoptubeandadd6.1gCsClplus0.3mlEthBr(10mg/ml).
•SpinintheBrinkmanSpeedfugefor10"at6KandtransferthesupernatanttoaQuickSealTube.Topoffwithheavymineraloil,balanceandseal.
•Spinat56Krpmforatleast20hours,removetheplasmidDNAbandwithaneedleandextractEthBrwithNaClsaturatedIsopropanol.Alternately,extractwithisoamyalcoholandprecipitatebyadding2volumesof70%EtOH.Wash,dryandresuspendin0.5mlTE.
•IftheEthBrwasremovedbyNaClsaturatedisopropanol,dialyzeagainst2litersofTEat4degreesfor24-48hours,andquantitate.
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