- DNA Extraction
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Method for SingleCell Electroporation
Inroduction Thistechniqueutilizeselectroporationinwhichabriefexternalhighvoltagepulseinducessufficienttransmembranepotentialtodisrupttheelectrostaticforcesmaintaininglipidbilayerstructure,causingthetemporarilyformationofsmallporesinthecellmembrane.DNAandotherchargedmoleculesarethenelectrophoreticallytransferredintothecellthroughthesepores.Followingpulsetermination,poresresealover10sto100sofms. SCEisapowerfultransfectionmethodsinceitreADIlyallowsthedeliveryofmultiplegeneseachcarriedbyindependentplasmidsintoasinglecell.Inaddition,SCEcanbeusedtotransfermacromoleculesbesidesDNAintocells,includingRNA,proteins,dyesanddrugs.Whilechargedmoleculesareactivelyelectrophoresedintocellswithhigherefficiency,nonchargedmoleculescanalsodiffusefromthemicropipetteintocellsthroughthepores. TheequipmentrequiredforSCEisrelativelyinexpensiveandcommontomanyneurosciencelaboratories.SCEdoesnotrequirethepurchaseofmoreexpensivecommercialelectroporators.Ifyoudonothaveanelectricalstimulator,wearecurrentlydevelopinganinexpensivedeviceforgeneratingtheelectricalstimulineededforthistechnique.PleasecontactKurtHaasifyouwouldbeinterestedinsuchadevice. ThemethoddescribedherehasbeensuccessfulfortransfectingindividualcellswithintheXenopustadpolebraininvivoandtherathippocampalorganotypicsliceculture.Modificationsofmicropipetteshape,electricalstimulationparameters,andmethodsoflocatingtargetcellsmaybenecessaryforotherpreparations. Voltagestimulator:GrassSD9Stimulator(Grass-Telefactor,WestWarwick,RI)**wearecurrentlydesigninganinexpensivevoltagestimulatorspecificallyforthistechnique.ContactKurtHaasforfurtherinformation Oscilloscope:optional,butaidsinmonitoringpulseshapeandcircuitintegrityandelectroderesistance Pipettepuller:P-87MicropipettePuller(SutterInstrumentCompany,CA) Micropipetteholder:mustallowsliverwiretoextendfrombackofmicropipette Manipulator:coarse,orcombinedcoarseandfinedependingonpreparation. pipetteglass:glasscapillarytubing.borosilicate-standardwallwithfilament.outerdiameter=1.5mm,insidediameter=0.86mm.WarnerInstrumentCorp. silverwire:0.25mmdiameter,toslideintomicropipette,andtouseasanexternalground leads:toconnectmicropipettesilverwireandgroundsilverwiretovoltagestimulator DNAsolution:Genesofinterestmustbeplacedintoexpressionvectorscontainingpromotersappropriatefortissuetype.WepurifyourplasmidDNAusingPromegaWizardPlusMidiPrepsDNApurificationsystem(Promega,Madison,WI).WedilutepurifiedDNAto0.2-1µg/µlandfillthemicropipettetipwith0.6-1µl.EfficiencyofSCEwasnotnoticeablyeffectedbytheioniccompositionoftheresUSPensionsolution(2mMCaCl2,20-200mMNaCl,oronlydH2O)orDNAconcentrationsrangingfrom0.1to5µg/µl.DNAsolutionwasintroducedintothemicropipetteusingeithera1-10µmEppindorfPipettortip,ora1ccplasticinsulinsyringethathadbeenmeltedoverflameandpulledtoalongfinetip. Circuitsetup:Athinsilverwire(diameter0.25mm)isinsertedintothemicropipettetouchingtheDNAsolutionatthetip.Themicropipetteisattachedtoacoarsemanipulatorwithapipetteholder.Asecondsilverwireisplacedindirectelectricalcontactwiththepreparation.ForSCEintadpoles,thegroundwireisplacednear(approximately1cm)thetadpoleunderaKimwipemoistenedwithsaline.Forhippocampalcultures,thegroundwireisplacedintheculturemedia.Thepositionofthegroundelectrodeisnotimportantaslongasitisincontactviaconductivesolutionwiththepreparation. FortransferofnegativelychargedDNAintocells,thesilverwireinthemicropipetteisconnectedtothenegativeterminalofaSD9Grassvoltagestimulator.Thegroundsilverwireisconnectedtothepositiveterminalofthestimulator. Microscope:Thetissue(here,eitherintacttadpole,orrathippocampalsliceculture)isplacedunderadissectingmicroscopeoranuprightOlympusBX50microscopeequippedwitha20Xlongworkingdistanceobjective. Usingvisualguidanceatlowmagnification,thetipoftheDNA-filledmicropipettewasinsertedintothetissueinaregioncontainingdensecellbodies.Itwasnotnecessarytodirectlyvisualizethemicropipettetiporthecellbeingtransfected.Thehighdensityofcellbodiesinourtwopreparations(thecellbodyregionsoftheoptictectumoftheXenopustadpolebrain,andoftheCA1andCA3regionsoftherathippocampalslice)madeitlikelythattheelectrodetipwouldbeinclosecontactwithacellsomata.Inpreparationswithlessdensecellbodiesthisblindtechniquemayyieldlowtransfectionefficiencies.Inthesecases,itmaybebeneficialtomonitortipcontactwithcellseitherbydirectvisualization,orbyrecordingtheelectricalresistancechangesatthemicropipettetip.Directvisualizationmayalsobenecessaryifonerequirestargetingtoaspecificcell. Stimulationparameters:WehavefoundthatawiderangeofelectricalstimulibetweenthemicropipetteandtheexternalgroundcanbeusedfortransfectionbySCE.WetestedsquarepulsesgeneratedbytheGrassSD9stimulatorandpulseswhichweremodulatedbyacapacitancecircuittoproduceasharphigh-voltagepeakfollowedbyanexponentialdecay.Wealsotestedtrainsofsquarepulses. Transfectionofneuronsinthetadpolebrainwashighwithexponentialdecaypulseswithpeakvoltagesof20Vandt=70ms.Slightlyhighertransfectionefficiencywasachievedwith0.5-1strainsof1mslongsquarepulsesat50Vand200Hz.Wefoundthat5repeatedpulsesortrainsofpulsesalsoincreasedtransfectionefficiency.Itisusefultomonitortheelectricalpulsedeliveredtothepreparationwithanoscilloscope.Thiscantellwhetherthemicropipettehascloggedandhastobereplaced.Cloggingcanoftenbealleviatedbyapplyingbriefpulseswithalternatingpolarity.Ingeneral,thesamemicropipettecanbeusedatmanysites,allowingrapidinsertionandstimulationfollowedbyremovalandreinsertionatanothersite.Wefindthatmultiplerapidstimulationseffectivelycompensateforoccasionalincorrectmicropipetteplacementsduetoblindinsertiontoyieldadequatelyhightransfectionefficiencies. Detectingtransfectedcells:WecommonlytesttransfectionsuccesswiththeClontech(ClontechLaboratories,PaloAlto,CA)plasmidpEGFP,whichdrivesgreenfluorescentproteinexpression(GFP)withastrongCMVpromoter.SinglecellstransfectedwithpEGFPexpressedbrightGFPwithin12hafterelectroporation,detectablebyepifluorescence.WerecommendfirsttestingSCEwithfluorescentdextrans(Molecularprobes,Eugene,OR),whichallowdirectvisualization,usingepifluorescence,ofdextransfillingcells.DuetotherelativelysmallsizeofdextranscomparedtoplasmidDNA,theelectricalstimulirequiredforSCEoffluorescentdextransismuchlessthanforDNA. Wehaveadaptedelectroporationfortransferofmacromolecules,includingDNAtothetadpolebraininvivo.ElectroporationpermitsonetotargetDNAtransfectiontoselectedregionsononesideofthebrain,inadditiontowidespreadtransfectiondemonstratedbyothersintheirsystems.Electroporationalsoofferscontroloverthenumberofcellstransfected(Fig.2).TheequipmentandmaterialsrequiredforbrainelectroporationaresimilartoSCE.Wehavetestedarangeofconditionsandparameters.Outlinedbelowaretheelectroporationconditionsthatworkwellinstage44-48tadpolebraininvivo. Microscope:Dissectingscope Capacitor:Custommade Voltagestimulator:GrassSD9stimulator(seeSCEnotesabove) Oscilloscope:Optional(seeSCEnotesabove) Picospritzer:PicospritzerII(GeneralValveCorporation) Pipettepuller:P-87MicropipettePuller(SutterInstrumentCo.CA) Micropipetteholder:Mustpermitpressureinjectionfrompicospritzer Platinumelectrodes:custommade,platinumplateelectrodesapprox1x2mmsolderedtoelectricleads(forwiringtostimulatorandcapacitor)andmountedonarodforusewithamicromanipulator. Micromanipulators:TwocoarseX,Y,Zmanipulators.Onetoholdthepressureinjectionpipette,onetoholdtheplatinumelectrodes. DNA:0.2-2.0µg/µlpurifiedplasmidDNA Pipetteglass:glasscapillarytubing,boroscilicate,standardwallwithfilament(WorldPrecisionInstrumentsInc.)Electrodetipdiameterwilldependontheapplication. Micropipettes:AmicropipetteandPicospritzerareusedtopressureinjectDNAintothebrainventricle.Theshapeandsizeofthepipettetipisnotcritical,butitmustbesharpenoughtoeasilyPiercethetissue,andlargeenoughtoquicklydelivertheDNA.WeusethePicospritzerIItodeliver75-125nlDNAsolutiondirectlyintothetadpolebrainventricle.Thesamepipetteisusedformultipleanimals. DNAsolution:Wetestedarangeofplasmidconcentrations(usingClontechpEGFP)andfoundthatconcentrationsrangingbetween0.2-2.0µg/µlyieldcomparablenumbersoffluorescentcells,withsimilarintensityofGFPfluorescence.DNAcanbedilutedindH2O,bufferedsaline,or2mMCaCl2.TheDNAsolutionwascoloredwith0.01%fastgreenasavisualaidforfillingthebrainventricle.Forco-electroporationoftwoplasmids,wemixplasmidsinaratioof1:1.Thistypicallygivesaco-transfectionrateof70%±10%(determinedforthesimultaneouselectroporationofofpEGFPandpDsRed). Setup:Adissectingmicroscopewithgoodopticsissufficient.Themicromanipulatorsareplacedeithersideofthestage.Onemanipulatorholdsthemicropipette,connectedtothePicospritzer.Theothermanipulatorholdstheplatinumelectrodesconnectedtothecapacitorandstimulator. Procedure:Theanesthetizedtadpoleisplacedonamoistenedkimwipeonthecenterofthemicroscopestage.ThemicropipettecontainingDNAisinsertedintotheventricleofthetadpolebrain,andtheDNAispressureinjectedintotheventricle.Forwidespreadelectroporation,DNAisinjectedtofilltheentirebrainventricle.Fortargetedelectroporationofaspecificbrainregion,aconcentratedbolusofDNAshouldbeinjectedascloseaspossIBLetotheregionofinterest.Themicropipetteisremoved,andtheplatinumelectrodesareimmediatelyloweredtocontactthetadpole"sskin,spanningthebrainregionofinterest(seeFig.2).2-7voltagepulsesaredelivered(dependingondesiredleveloftransfection).Effervescentbubblesareproducedattheelectrodetipswheretheycontacttheskin.Thelevelofeffervescenceisagoodindicatorofwhetheryouhaveachievedelectroporationvselectrocution.Thereshouldbenumeroussmallbubblesalongtheelectrodetips.Ifthebubblesarelargeandbubblingover,thevoltageistoolargeandtheanimalwilldie.Anothervisualcueistheamountofshockthetadpoledisplays.Thetadpoleeyesusuallyflickinresponsetotheelectroporation.Ifthewholebodyjolts,thevoltageistoolarge.Afterelectroporation,thetadpoleisquicklyreturnedtorearingsolution,whereitusuallyrecoverswithin10minutes. TheDNAconstructscanbetargetedtojustonesideofthebrain,orifdesired,thewholebraincanbetransfected.Thisisachievedbyregulatingthevoltagepolarity.Ifonlyonesideofthebrainistobetransfected,thepolaritysettingonthestimulatorissetsothenegativelychargedDNAmovestowardsthepositiveelectrode.Ifbothsidesofthebrainaretobetransfected,thepolaritymustbeswitchedwhilethevoltagepulsesarebeingdelivered. Stimulationparameters:Dependingonthenumberoftransfectioncellsdesired,2-7pulsesof30-50Vwithanexponentialdecayof70msareoptimal.Totransfectfewercells,reducethenumbersofpulses. Detectingtransfectedcells:TransfectedcellsexpressingGFParedetectedbystandardfluorescencemicroscopy. Troubleshooting:Weoccasionallyseesomebleedinginthebrainventricle24hrsafterelectroporation.Thisusuallyclearsupby48hrs.Propidiumiodidestainingindicatedthatelectroporationdoesnotcauseanincreaseincelldeath.Forgoodchargeconduction:-Ensurethatthespecimenremainsmoist-Theplatinumelectrodesmustbecleanedregularly.
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Single-cellelectroporation(SCE)isatechniquewehavedevelopedtodelivergenesintoindividualcellswithinintacttissues,althoughitmayalsobeapplicabletocellsindispersecultures.TargetingtranscriptiontoindividualcellsisachievedbyrestrictingboththeDNAandtheelectricfieldrequiredforelectroporationtothe0.6-1µmtipofaglassmicroPipette.Thistechniqueisrelativelyeasytosetupandperform,canyieldhightransfectionrates,andrequiresrelativelyinexpensive,commonlaboratoryequipment.ApaperofthistechniqueispublishedintheMarchissueofNeuron,2001.Equipment Microscope:dissectingscope,oruprightwithlongworkingdistance,lowpower(~20X)objective
Materials DNA:purifiedplasmidDNA
Methods Micropipettes:Glassmicropipettesmustbecustomizedforeachpreparation.Wepullglasscapillarytubing(withfilament)usingaP-87MicropipettePuller.Ingeneral,apatch-clamptypeelectrodemaybesufficient.Thetipsizeshouldbearound0.6-1µmandhavearesistanceabout10Mwhenfilledwithstandardintracellularrecordingsolution.Shankdimensionscanvarydependingonthetissueusedandmustbalancerequirementsforpreventingthepipettefrombreaking(widershank)andreducingtissuedamagefromthepipetteinsertion(thinnershank).
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ MethodforBulkTissueElectroporationLisaFoa,ClineLab
Equipment Materials Methods