Pectinengineering:modificationofpotatopectinbyinvivoexpressionofanendo-1,4-β-D-galactanase.
Sørensen,S.O.,Pauly,M.,Bush,M.,Skjøt,M.,McCann,M.C.,Borkhardt,B.&Ulvskov,P.(2000).ProceedingsoftheNationalAcademyofSciences,97(13),7639-7644.
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Potatotuberpectinisrichingalactan(oligomerofβ-1,4-linkedgalactosylresidues).Wehaveexpressedafungalendo-galactanase
CDNAinpotatoundercontrolofthegranuleboundstarchsynthasepromotertoobtainexpressionoftheenzymeintubersduringgrowth.Thetransgenicplantsdisplayednoalteredphenotypecomparedwiththewildtype.Fungalendo-galactanaseactivitywasquantifiedinthetransgenictubers,anditsexpressionwasverifiedbyWesternblotanalysis.Theeffectoftheendo-galactanaseactivityonpotatotuberpectinwasstudiedbyFouriertransforminfraredmicrospectroscopy,immuno-goldlabeling,andsugaranalysis.Allanalysesrevealedalterationsinpectincomposition.MonosaccharidecompositionoftotalcellwallsandisolatedrhamnogalacturonanIfragmentsshowedareductioningalactosylcontentto30%inthetransformantscomparedwiththewildtype.Increasedsolubilityofpectinfromtransgeniccellwallsbyendo-polygalacturonase/pectinmethylesterasedigestionpointstootherchangesinwallarchitecture.
Expressionandcharacterizationofanendo-1,4-β-galactanasefromEmericellanidulansinPichiapastorisforenzymaticdesignofpotentiallyprebioticoligosaccharidesfrompotatogalactans.
Michalak,M.,Thomassen,L.V.,Roytio,H.,Ouwehand,A.C.,Meyer,A.S.&Mikkelsen,J.D.(2012).EnzymeandMicrobialTechnology,50(2),121-129.
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Potatopulpisahigh-volumeside-streamfromindustrialpotatostarchmanufacturing.Enzymaticallysolubilizedβ-1,4-galactan-richpotatopulppolysaccharidesofmolecularweights>100kDa(SPPP)arehighlybifidogenicinhumanfecalsamplefermentationsinvitro.Theobjectiveofthepresentstudywastousepotatoβ-1,4-galactanandtheSPPPassubstratesforenzymaticproductionofpotentiallyprebioticcompoundsoflowerandnarrowermolecularweight.Anovelendo-1,4-β-galactanasefromEmericellanidulans(anamorphAspergillusnidulans),GHfamily53,wasproducedinarecombinantPichiapastorisstrain.TheenzymewaspurifiedbyCu2+affinitychromatographyanditsoptimalreactionconditionsweredeterminedtopH5and49°Cviaastatisticalexperimentaldesign.ThespecificactivityoftheE.nidulansenzymeexpressedinP.pastoriswassimilartothatofanendo-1,4-β-galactanasefromAspergillusnigerusedasbenchmark.TheE.nidulansenzymeexpressedinP.pastorisgeneratedaspectrumpoly-andoligo-saccharideswhichwerefractionatedbymembranefiltration.Thepotentialgrowthpromotingpropertiesofeachfractionwereevaluatedbygrowthofbeneficialgutmicrobesandpathogenicbacteria.Allthegalactan-andSPPP-derivedproductspromotedthegrowthofprobioticstrainsofBifidobacteriumlongumandLactobacillusacidophilusandgenerallydidnotsupportthepropagationofClostridiumperfringensinsingleculturefermentations.NotablythegrowthofB.longumwassignificantlyhigher(p<0.05) or="" at="" least="" as="" good="" on="" galactan-="" and="" sppp-derived="" products="" as="" fructooligosaccharides="" (fos).="" except="" in="" one="" case="" these="" products="" did="" not="" support="" the="" growth="" of="" the="" pathogen="">0.05)>Cl.perfringenstoanysignificantextent.
Organizationofpecticarabinanandgalactansidechainsinassociationwithcellulosemicrofibrilsinprimarycellwallsandrelatedmodelsenvisaged.
Zykwinska,A.,Thibault,J.F.&Ralet,M.C.(2007).JournalofExperimentalBotany,58(7),1795-1802.
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Thestructureofarabinanandgalactandomainsinassociationwithcellulosemicrofibrilswasinvestigatedusingenzymaticandalkalidegradationprocedures.Sugarbeetandpotatocellwallresidues(called‘natural’composites),richinpecticneutralsugarsidechainsandcellulose,aswellas‘artificial’composites,createdby
invitroadsorptionofarabinanandgalactansidechainsontoprimarycellwallcellulose,werestudied.Thesecompositesweresequentiallytreatedwithenzymesspecificforpecticsidechainsandhotalkali.Thedegradationapproachusedshowedthatmostofthearabinanandgalactansidechainsareinstronginteractionwithcelluloseandarenothydrolysedbypecticsidechain-degr
ADIngenzymes.Itseemsunlikelythatisolatedarabinanandgalactanchainsareabletotetheradjacentmicrofibrils.However,cellulosemicrofibrilsmaybetetheredbydifferentpecticsidechainsbelongingtothesamepecticmacromolecule.
Solubilizationofgalactosyltransferasethatsynthesizes1,4‐β-galactansidechainsinpecticrhamnogalacturonanI.
Geshi,N.,Pauly,M.&Ulvskov,P.(2002).PhysiologiaPlantarum,114(4),540-548.
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β-1,4-Galactangalactosyltransferase(GT)activitywassolubilizedfrompotatomicrosomalmembranesinthepresenceof78mM3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulphonicacid.ThesolubilizedGTactivitytransferred14[C]galactosefromUDP-14[C]galactoseontotheacceptor-substratescomposedofrhamnogalacturonan(RG)withshortgalactanchains(RG-A,approximately1.2MDa,mol%Gal/Rha=0.7;RG-B,approximately21kDa,mol%Gal/Rha=1.2).However,shorterRGcontainingshortgalactanchains(approximately2kDaand1.2kDa),RGoligomerswithoutgalactosyl-residues,galactan,andgalactooligomersdidnotactasacceptor-substrates.OptimalpHfor14[C]incorporationontoRG-AandRG-Bwasaround5.6and7.5,respectively.The14[C]-labelledproductssynthesizeduponRG-AandRG-BcouldbedigestedwithaRGspecificlyaseintosmallerRGfragments.1,4-β-Endogalactanasecouldnotdigesttheformerproduct,whereasthelatterproductwasdigestedto14[C]galactobioseand14[C]galactose.ThisdemonstratesthatatleasttwoGTactivitiesweresolubilizedfrompotatomicrosomalmembranes.OnehadoptimalpHaround5.6totransfergalactosylresiduesontoRG-A,whereastheotherhadoptimalpHaround7.5totransfergalactosylresiduesontoRG-B.BothsynthesizedgalactanattachedtotheRGbackboneofRG-AandRG-B,andthegalactansynthesizedontotheRG-Bacceptorwas1,4-β-linked.
Invitrobiosynthesisof1,4-β-galactanattachedtorhamnogalacturonanI.
Geshi,N.,Jørgensen,B.,Scheller,H.V.&Ulvskov,P.(2000).Planta,210(4),622-629.
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Thebiosynthesisofgalactanwasinvestigatedusingmicrosomalmembranesisolatedfroms
USPension-culturedcellsofpotato(
SolanumtuberosumL.var.AZY).IncubationofthemicrosomalmembranesinthepresenceofUDP-[
14C]galactoseresultedinaradioactiveproductinsolublein70%methanol.Theproductreleasedonly[
14C]galactoseuponacidhydrolysis.Treatmentoftheproductwith
Aspergillusnigerendo-1,4-β-galactanasereleased65–70%oftheradioactivitytoa70%-methanol-solublefraction.Toaminorextent,[
14C]galactosewasalsoincorporatedintoproteins,howeverthesegalactoproteinswerenotasubstratefor
Aspergillusnigerendo-1,4-β-galactanase.Thus,themajorityofthe
14C-labelledproductwas1,4-β-galactan.Compoundsreleasedbytheendo-1,4-β-galactanasetreatmentweremainly[
14C]galactoseand[
14C]galactobiose,indicatingthatthesynthesized1,4-β-galactanwaslongerthanatrimer.Invitrosynthesisof1,4-β-galactanwasmostactivewith6-d-oldcells,whichareinthemiddleofthelineargrowthphase.TheoptimalsynthesisoccurredatpH6.0inthepresenceof7.5 mMMn
2+.
AspergillusaculeatusrhamnogalacturonaseAdigestedatleast50%ofthelabelledproducttosmallerfragmentsofapprox.14 kDa,suggestingthatthesynthesized[
14C]galactanwasattachedtotheendogenousrhamnogalacturonanI.WhenrhamnogalacturonaseAdigestsofthelabelledproductweresubsequentlytreatedwithendo-1,4-β-galactanase,radioactivitywasnotonlyfoundas[
14C]galactoseor[
14C]galactobiosebutalsoaslargerfragments.Thelargerfragmentswerelikelythe[
14C]galactoseor[
14C]galactobiosestillattachedtotherhamnogalacturonanbackbonesincetreatmentwithβ-galactosidasetogetherwithendo-1,4-β-galactanasedigestedallradioactivitytothefractionelutingas[
14C]galactose.Thedataindicatethatthemajorityofthe[
14C]galactanwasattacheddirectlytotherhamnoseresiduesinrhamnogalacturonanI.Thus,isolatedmicrosomalmembranescontainenzymeactivitiestobothinitiateandelongate1,4-β-galactansidechainsintheendogenouspecticrhamnogalacturonanI.
Anovelmechanismofxylanbindingbyalectin-likemodulefromStreptomyceslividansxylanase10A.
Boraston,A.B,Tomme,P.,Amandoron,E.A.&Kilburn,D.G.(2000).Biochem.J,350,933-941.
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TheC-terminalmoduleofxylanase10AfromStreptomyceslividansisafamily13carbohydrate-bindingmodule(CBM13).CBM13bindsmono-andoligo-saccharideswithassociationconstantsof1×102M-1–1×103M-1.Itappearstobespecificonlyforpyranosesugars.CBM13bindsinsolubleandsolublexylan,holocellulose,pachyman,lichenan,arabinogalactanandlaminarin.Theassociationconstantforbindingtosolublexylanis(6.2±0.6)×103/molofxylanpolymer.Site-directedmutationindicatestheinvolvementofthreefunctionalsitesonCBM13inbindingtosolublexylan.Thesitesaresimilarinsequence,andarepredictedtohavesimilarstructures,totheα,βandγsitesofricintoxinB-chain,whichisalsoinfamily13.TheaffinityofasinglebindingsiteonCBM13forsolublexylanisonly≈(0.5±0.1)×103/molofxylan.ThebindingofCBM13tosolublexylaninvolvesadditiveandco-operativeinteractionsbetweenthethreebindingsites.ThismechanismofbindinghasnotpreviouslybeenreportedforCBMsbindingpolysaccharides.CBM13isthefirstbacterialmodulefromfamily13tobedescribedindetail.
Characterizationofthebga1-encodedglycosidehydrolasefamily35β-galactosidaseofHypocreajecorinawithgalacto-β-D-galactanaseactivity.
Gamauf,C.,Marchetti,M.,Kallio,J.,Puranen,T.,Vehmaanperä,J.,Allmaier,G.,Kubicek,C.P.&Seiboth,B.(2007).FEBSJournal,274(7),1691-1700.
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Theextracellularbga1-encodedβ-galactosidaseofHypocreajecorina(Trichodermareesei)wasoverexpressedunderthepyruvatkinase(pki1)promoterregionandpurifiedtoapparenthomogeneity.Themonomericenzymeisaglycoproteinwithamolecularmassof118.8±0.5kDa(MALDI-MS)andanisoelectricpointof6.6.Bga1isactivewithseveraldisaccharides,e.g.lactose,lactuloseandgalactobiose,aswellaswitharyl-andalkyl-β-D-galactosides.Basedonthecatalyticefficiencies,lactitolandlactobionicacidarethepoorestsubstratesando-nitrophenyl-β-D-galactosideandlactulosearethebest.ThepHoptimumforthehydrolysisofgalactosidesis5.0,andtheoptimumtemperaturewasfoundtobe60°C.Bga1isalsocapableofreleasingD-galactosefromβ-galactansandisthusactuallyagalacto-β-D-galactanase.β-GalactosidaseisinhibitedbyitsreactionproductD-galactoseandtheenzymealsoshowsasignificanttransferaseactivitywhichresultsintheformationofgalacto-oligosaccharides.
Pectinbiosynthesis:GALS1inArabidopsisthalianaisaβ-1,4-galactanβ-1,4-galactosyltransferase.
Liwanag,A.J.M.,Ebert,B.,Verhertbruggen,Y.,Rennie,E.A.,Rautengarten,C.,Oikawa,A.,Andersen,M.C.F.,Clausen,M.H.&Scheller,H.V.(2012).ThePlantCell,24(12),5024-5036.
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β-1,4-Galactansareabundantpolysaccharidesinplantcellwalls,whicharegenerallyfoundassidechainsofrhamnogalacturonanI.RhamnogalacturonanIisamajorcomponentofpectinwithabackboneofalternatingrhamnoseandgalacturonicacidresiduesandsidechainsthatincludeα-1,5-arabinans,β-1,4-galactans,andarabinogalactans.Manyenzymesarerequiredtosynthesizepectin,butfewhavebeenidentified.Pectinismostabundantinprimarywallsofexpandingcells,butβ-1,4-galactanisrelativelyabundantinsecondarywalls,especiallyintensionwoodthatformsinresponsetomechanicalstress.WeinvestigatedenzymesinglycosyltransferasefamilyGT92,whichhasthreemembersinArabidopsisthaliana,whichwedesignatedGALACTANSYNTHASE1,(GALS1),GALS2andGALS3.Loss-of-functionmutantsinthecorrespondinggeneshadadecreasedβ-1,4-galactancontent,andoverexpressionofGALS1resultedinplantswith50%higherβ-1,4-galactancontent.Theplantsdidnothaveanobviousgrowthphenotype.Heterologouslyexpressedandaffinity-purifiedGALS1couldtransferGalresiduesfromUDP-Galontoβ-1,4-galactopentaose.GALS1specificallyformedβ-1,4-galactosyllinkagesandcouldaddsuccessiveβ-1,4-galactosylresiduestotheacceptor.TheseobservationsconfirmtheidentityoftheGT92enzymeasβ-1,4-galactansynthase.Theidentificationofthisenzymecouldprovideanimportanttoolforengineeringplantswithimprovedbioenergyproperties.
Glycationoflysozymewithgalactose,galactooligosaccharidesandpotatogalactanthroughtheMaillardreactionandoptimizationoftheproductionofprebioticglycoproteins.
Seo,S.,Karboune,S.,Yaylayan,V.&L’Hocine,L.(2012).ProcessBiochemistry,47(2),297-304.
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Theproductionofglycatedlysozyme(LZM),withgalactose,galactooligosaccharides(GOSs)andpotatogalactanthroughtheMaillardreaction,wasinvestigated.Thepercentblockedlysine,estimatedfromthefurosinecontent,reachedamaximumvalueof11.2%forLZM:galactanconjugatesafter1dayincubationataawof0.65.Amaximumpercentblockedlysineof7.0and13.5%wereobtainedforLZM:galactose/GOSconjugatesatalowerawof0.45after3and7days,respectively.However,thelowpercentblockedlysineandthehighproteinaggregationindexofLZM:galactose/GOSconjugatesataw0.79and0.65revealedtheprevalenceofthedegradationoftheAmadoricompoundsandtheproteincross-linking.MassspectrometryofLZMconjugatesrevealedtheformationofdifferentglycoforms.GlycatedLZMscontaininguptosevengalactosemoietieswereformed;whileonlymono-anddiglycatedLZMswithGOSsweredetected.2–3molofgalactanwereconjugatedto1molofLZM.Responsesurfacemethodology,basedona5-leveland3-factorcentralcompositedesign,revealedthatmolarratioandtemperaturewerethemostsignificantvariablesfortheglycationofLZMwithGOSs.Theoptimalconditionsleadingtoahighpercentblockedlysine(16.11%)withalowproteinaggregationindex(0.11)wereidentified:temperatureof49.5°C,LZM:GOSmolarratioof1:9andawof0.65.Tothebestofourknowledge,thisisthefirststudyontheoptimizationofLZMglycationwithGOSs.
Subcellularlocalizationandtopologyofβ(1→4)galactosyltransferasethatelongatesβ(1→4)galactansidechainsinrhamnogalacturonanIinpotato.
Geshi,N.,Jørgensen,B.&Ulvskov,P.(2004).Planta,218(5),862-868.
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ThesubcellularlocalizationandtopologyofrhamnogalacturonanI(RG-I)β(1→4)galactosyltransferase(s)(β[1→4]GalTs)frompotato(
SolanumtuberosumL.)wereinvestigated.Usingtwo-stepdiscontinuoussucrosestepgradients,galactosyltransferase(GalT)activitythatsynthesized70%-methanol-insolubleproductsfromUDP-[
14C]Galwasdetectedinboththe0.5Msucrosefractionandthe0.25/1.1Msucroseinterface.TheformerfractioncontainedmainlysolubleproteinsandthelatterwasenrichedinGolgivesiclesthatcontainedmostoftheUDPaseactivity,aGolgi
Marker.Bygel-filtrationanalysis,productsof180–2,000Dawerefoundinthesolublefraction,whereasintheGolgi-enrichedfractiontheproductswerelargerthan80kDaandcouldbedigestedwithrhamnogalacturonanlyaseandβ(1,4)
endogalactanasetoyieldsmallerrhamnogalacturonanoligomers,galactobioseandgalactose.The
endogalactanaserequiresβ(1→4)galactanswithatleastthreegalactosylresiduesforcleavage,indicatingthattheenzyme(s)presentinthe0.25/1.1MSucinterfacetransferredoneormoregalactosylresiduestopre-existingβ(1→4)galactansproducingRG-Isidechainsintotallongerthanatrimer.Thus,theβ(1→4)GalTactivitythatelongatesβ(1→4)-linkedgalactanonRG-IwaslocatedintheGolgiapparatus.Thisβ(1→4)GalTactivitywasnotreducedaftertreatmentoftheGolgivesicleswithproteinase,butapproximately75%oftheactivitywaslostaftertreatmentwithproteinaseinthepresenceofTritonX-100.Inaddition,theβ(1→4)GalTactivitywasrecoveredinthedetergentphaseaftertreatmentofGolgivesicleswithTritonX-114.Takentogether,theseobservationssupportedtheviewthattheRG-Iβ(1→4)GalTthatelongatesβ(1→4)galactanwasmainlylocatedintheGolgiapparatusandintegratedintothemembranewithitscatalyticsitefacingthelumen.
Microwave-assistedalkalineextractionofgalactan-richrhamnogalacturonanIfrompotatocellwallby-product.
Khodaei,N.,Karboune,S.&Orsat,V.(2016).Foodchemistry,190,495-505.
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Galactan-richrhamnogalacturonanI(RGI),exhibitingpromisinghealthbenefits,isthemostabundantpolysaccharideinpotatopulpby-product.Inthepresentstudy,themicrowave-assistedalkalineextractionofgalactan-richRGIwasinvestigated.Solid/liquidratiowasidentifiedasthemostsignificantparameteraffectinglinearlyyieldandgalactose/rhamnosecontents.Microwavepowerandsolid/liquidratioexhibitedasignificantadverseinteractiveeffectontheyield.GalactosecontentofextractedpolysaccharidescanbemodulatedbycompromisingbetweenKOHconcentrationandextractiontime,whichexhibitedadverseinteraction.Optimumconditionswereidentifiedusingtheestablishedpredictedmodelsandconsistedoftreatmentofpotatocellwallatsolid/liquidratioof2.9%(w/v)with1.5 MKOHundermicrowavepowerof36.0 Wfor2.0 min.Yieldofintactgalactan-richRGIof21.6%andproductivityof192.0 g/L hwereachieved.ThefunctionalpropertiesofRGI-richpolysaccharideswerecomparableorsuperiortopotatogalactanandorangeshomogalacturonan.
Prebioticpotentialofneutraloligo-andpolysaccharidesfromseedmucilageofHyptissuaveolens.
Mueller,M.,Čavarkapa,A.,Unger,F.M.,Viernstein,H.&Praznik,W.(2017).Foodchemistry,221,508-514.
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Prebioticsareselectivelyfermentedbythegastrointestinalmicroflora,resultinginbenefitstohumanhealth.TheseedmucilageofHyptissuaveolenscontainsneutralandacidicpolysaccharidesinaratioof1:1.Theneutralpolysaccharidesconsistofgalactose,glucoseandmannosewhereastheacidicpolysaccharidescontainfucose,xyloseand4-O-methylglucuronicacid-residues.Thegrowthofprobioticsinthepresenceoftotal,acidicorneutralpolysaccharidesandoligosaccharideswastestedusingturbiditymeasurements.Themajority(11outof14)ofthetestedprobioticstrainssignificantlygrewintheneutralfraction.Growthoccurredwithsometimedelay,butmaybelongerlastingthanwithotherlowermolecularprebiotics.TheextentofgrowthincreasedwithneutralpolysaccharidesfromH.suaveolenscorrespondingtotheexternallyavailablegalactoseunits(20%).Inconclusion,neutralpoly-andoligosaccharidesfromH.suaveolenshaveaprebioticpotentialcharacterizedbyadelayedbutlonglastingeffect.
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